Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk5rap3Q99LM2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cdk5rap3Q99LM2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cdk5rap3Q99LM2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap3Q99LM2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap3Q99LM2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk5rap3Q99LM2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk5rap3Q99LM2 Gm10399-202ENSMUST00000202768 748 ntBASIC20.93■□□□□ 0.94
Cdk5rap3Q99LM2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.93■□□□□ 0.94
Cdk5rap3Q99LM2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk5rap3Q99LM2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk5rap3Q99LM2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap3Q99LM2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk5rap3Q99LM2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk5rap3Q99LM2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cdk5rap3Q99LM2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk5rap3Q99LM2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk5rap3Q99LM2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdk5rap3Q99LM2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk5rap3Q99LM2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
Cdk5rap3Q99LM2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cdk5rap3Q99LM2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk5rap3Q99LM2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk5rap3Q99LM2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk5rap3Q99LM2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk5rap3Q99LM2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk5rap3Q99LM2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk5rap3Q99LM2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk5rap3Q99LM2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk5rap3Q99LM2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk5rap3Q99LM2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap3Q99LM2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap3Q99LM2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap3Q99LM2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap3Q99LM2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cdk5rap3Q99LM2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap3Q99LM2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap3Q99LM2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap3Q99LM2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap3Q99LM2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap3Q99LM2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap3Q99LM2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap3Q99LM2 Gm10232-201ENSMUST00000089221 720 ntBASIC20.85■□□□□ 0.93
Cdk5rap3Q99LM2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap3Q99LM2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms