Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Sh3rf3Q8C120 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3rf3Q8C120 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3rf3Q8C120 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sh3rf3Q8C120 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3rf3Q8C120 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3rf3Q8C120 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3rf3Q8C120 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3rf3Q8C120 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3rf3Q8C120 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sh3rf3Q8C120 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3rf3Q8C120 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3rf3Q8C120 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sh3rf3Q8C120 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Gm22238-201ENSMUST00000175222 88 ntBASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Gm7143-201ENSMUST00000222811 859 ntBASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf3Q8C120 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf3Q8C120 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sh3rf3Q8C120 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sh3rf3Q8C120 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Sh3rf3Q8C120 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.02■□□□□ 0.96
Sh3rf3Q8C120 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.02■□□□□ 0.96
Sh3rf3Q8C120 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.02■□□□□ 0.96
Sh3rf3Q8C120 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3rf3Q8C120 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3rf3Q8C120 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Sh3rf3Q8C120 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3rf3Q8C120 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3rf3Q8C120 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf3Q8C120 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf3Q8C120 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf3Q8C120 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf3Q8C120 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf3Q8C120 Gm34220-201ENSMUST00000223001 2709 ntBASIC21■□□□□ 0.95
Sh3rf3Q8C120 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf3Q8C120 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Gm9870-201ENSMUST00000063874 645 ntBASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf3Q8C120 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf3Q8C120 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf3Q8C120 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf3Q8C120 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf3Q8C120 Golph3-202ENSMUST00000226517 2359 ntBASIC20.97■□□□□ 0.95
Sh3rf3Q8C120 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sh3rf3Q8C120 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3rf3Q8C120 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3rf3Q8C120 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3rf3Q8C120 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3rf3Q8C120 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms