Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmx3P42581 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.68■□□□□ 0.26
Hmx3P42581 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.68■□□□□ 0.26
Hmx3P42581 Gm10420-201ENSMUST00000121713 882 ntBASIC16.68■□□□□ 0.26
Hmx3P42581 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.68■□□□□ 0.26
Hmx3P42581 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmx3P42581 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmx3P42581 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.68■□□□□ 0.26
Hmx3P42581 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmx3P42581 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmx3P42581 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmx3P42581 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Hmx3P42581 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmx3P42581 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hmx3P42581 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hmx3P42581 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmx3P42581 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmx3P42581 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Hmx3P42581 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmx3P42581 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.67■□□□□ 0.26
Hmx3P42581 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmx3P42581 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmx3P42581 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hmx3P42581 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmx3P42581 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmx3P42581 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmx3P42581 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmx3P42581 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmx3P42581 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Hmx3P42581 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmx3P42581 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hmx3P42581 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Hmx3P42581 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.66■□□□□ 0.26
Hmx3P42581 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.66■□□□□ 0.26
Hmx3P42581 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.66■□□□□ 0.26
Hmx3P42581 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.66■□□□□ 0.26
Hmx3P42581 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmx3P42581 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmx3P42581 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmx3P42581 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hmx3P42581 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmx3P42581 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hmx3P42581 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.26
Hmx3P42581 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmx3P42581 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmx3P42581 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmx3P42581 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.64■□□□□ 0.25
Hmx3P42581 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmx3P42581 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.64■□□□□ 0.25
Hmx3P42581 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hmx3P42581 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmx3P42581 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmx3P42581 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.64■□□□□ 0.25
Hmx3P42581 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.64■□□□□ 0.25
Hmx3P42581 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmx3P42581 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmx3P42581 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hmx3P42581 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmx3P42581 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hmx3P42581 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmx3P42581 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmx3P42581 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmx3P42581 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hmx3P42581 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmx3P42581 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.62■□□□□ 0.25
Hmx3P42581 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmx3P42581 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmx3P42581 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmx3P42581 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Hmx3P42581 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmx3P42581 Grk6-206ENSMUST00000224995 2971 ntBASIC16.62■□□□□ 0.25
Hmx3P42581 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmx3P42581 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmx3P42581 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmx3P42581 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Hmx3P42581 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Hmx3P42581 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmx3P42581 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hmx3P42581 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmx3P42581 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Hmx3P42581 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmx3P42581 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmx3P42581 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.61■□□□□ 0.25
Hmx3P42581 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hmx3P42581 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.6■□□□□ 0.25
Hmx3P42581 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.6■□□□□ 0.25
Hmx3P42581 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmx3P42581 Cap2-205ENSMUST00000225824 1634 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms