Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.04■□□□□ 0.48
NgfP01139 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.04■□□□□ 0.48
NgfP01139 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.04■□□□□ 0.48
NgfP01139 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.04■□□□□ 0.48
NgfP01139 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.04■□□□□ 0.48
NgfP01139 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NgfP01139 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NgfP01139 Mir6236-201ENSMUST00000184437 123 ntBASIC18.03■□□□□ 0.48
NgfP01139 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.03■□□□□ 0.48
NgfP01139 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.03■□□□□ 0.48
NgfP01139 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NgfP01139 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NgfP01139 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NgfP01139 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NgfP01139 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NgfP01139 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NgfP01139 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NgfP01139 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.02■□□□□ 0.48
NgfP01139 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NgfP01139 Gm7291-201ENSMUST00000199147 382 ntBASIC18.02■□□□□ 0.48
NgfP01139 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.02■□□□□ 0.48
NgfP01139 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NgfP01139 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NgfP01139 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NgfP01139 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
NgfP01139 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NgfP01139 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NgfP01139 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NgfP01139 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NgfP01139 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NgfP01139 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NgfP01139 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NgfP01139 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NgfP01139 Gm10849-201ENSMUST00000100397 618 ntBASIC18.01■□□□□ 0.47
NgfP01139 Gm42642-201ENSMUST00000200683 355 ntBASIC18.01■□□□□ 0.47
NgfP01139 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NgfP01139 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NgfP01139 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NgfP01139 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NgfP01139 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NgfP01139 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NgfP01139 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18■□□□□ 0.47
NgfP01139 Gm26571-201ENSMUST00000181399 666 ntBASIC18■□□□□ 0.47
NgfP01139 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NgfP01139 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NgfP01139 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NgfP01139 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NgfP01139 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
NgfP01139 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
NgfP01139 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NgfP01139 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NgfP01139 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NgfP01139 Gm27405-201ENSMUST00000184201 112 ntBASIC17.99■□□□□ 0.47
NgfP01139 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.99■□□□□ 0.47
NgfP01139 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NgfP01139 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NgfP01139 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NgfP01139 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Gm11421-201ENSMUST00000122124 294 ntBASIC17.98■□□□□ 0.47
NgfP01139 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NgfP01139 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NgfP01139 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NgfP01139 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NgfP01139 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NgfP01139 Gm42569-201ENSMUST00000200539 472 ntBASIC17.97■□□□□ 0.47
NgfP01139 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NgfP01139 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.96■□□□□ 0.47
NgfP01139 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NgfP01139 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NgfP01139 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NgfP01139 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NgfP01139 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.96■□□□□ 0.47
NgfP01139 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.96■□□□□ 0.47
NgfP01139 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NgfP01139 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NgfP01139 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.96■□□□□ 0.47
NgfP01139 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
NgfP01139 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NgfP01139 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NgfP01139 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.95■□□□□ 0.46
NgfP01139 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NgfP01139 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 125.1 ms