Protein–RNA interactions for Protein: E0CX42

Gm4491, Predicted gene 4491, mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4491E0CX42 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm4491E0CX42 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Gm7332-201ENSMUST00000118351 454 ntBASIC10.96□□□□□ -0.65
Gm4491E0CX42 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm4491E0CX42 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Gm4491E0CX42 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gm4491E0CX42 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gm4491E0CX42 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gm4491E0CX42 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Gm4491E0CX42 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gm4491E0CX42 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Gm4491E0CX42 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC10.95□□□□□ -0.66
Gm4491E0CX42 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 AC122428.2-201ENSMUST00000216321 1832 ntBASIC10.95□□□□□ -0.66
Gm4491E0CX42 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm4491E0CX42 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Gm43592-201ENSMUST00000196922 1165 ntBASIC10.94□□□□□ -0.66
Gm4491E0CX42 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 AC152827.1-201ENSMUST00000221143 2189 ntBASIC10.94□□□□□ -0.66
Gm4491E0CX42 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm4491E0CX42 Gm4430-201ENSMUST00000192413 1943 ntBASIC10.94□□□□□ -0.66
Gm4491E0CX42 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Gm11847-201ENSMUST00000125165 1119 ntBASIC10.93□□□□□ -0.66
Gm4491E0CX42 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm4491E0CX42 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms