Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tmc1Q8R4P5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.91■■□□□ 1.58
Tmc1Q8R4P5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Tmc1Q8R4P5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Tmc1Q8R4P5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tmc1Q8R4P5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tmc1Q8R4P5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Tmc1Q8R4P5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Tmc1Q8R4P5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Tmc1Q8R4P5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Tmc1Q8R4P5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Tmc1Q8R4P5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
Tmc1Q8R4P5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tmc1Q8R4P5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Tmc1Q8R4P5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Tmc1Q8R4P5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tmc1Q8R4P5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Tmc1Q8R4P5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tmc1Q8R4P5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tmc1Q8R4P5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tmc1Q8R4P5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Tmc1Q8R4P5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tmc1Q8R4P5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tmc1Q8R4P5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Tmc1Q8R4P5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 Gm15820-201ENSMUST00000201566 728 ntBASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tmc1Q8R4P5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tmc1Q8R4P5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.84■■□□□ 1.57
Tmc1Q8R4P5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tmc1Q8R4P5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.84■■□□□ 1.57
Tmc1Q8R4P5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tmc1Q8R4P5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tmc1Q8R4P5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.83■■□□□ 1.57
Tmc1Q8R4P5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Tmc1Q8R4P5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Tmc1Q8R4P5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Tmc1Q8R4P5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Tmc1Q8R4P5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Tmc1Q8R4P5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tmc1Q8R4P5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tmc1Q8R4P5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tmc1Q8R4P5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC24.82■■□□□ 1.56
Tmc1Q8R4P5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Tmc1Q8R4P5 Hsf1-204ENSMUST00000226872 2104 ntBASIC24.82■■□□□ 1.56
Tmc1Q8R4P5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tmc1Q8R4P5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tmc1Q8R4P5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tmc1Q8R4P5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tmc1Q8R4P5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tmc1Q8R4P5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tmc1Q8R4P5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.8■■□□□ 1.56
Tmc1Q8R4P5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Tmc1Q8R4P5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC24.8■■□□□ 1.56
Tmc1Q8R4P5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC24.8■■□□□ 1.56
Tmc1Q8R4P5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tmc1Q8R4P5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Tmc1Q8R4P5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC24.79■■□□□ 1.56
Tmc1Q8R4P5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Tmc1Q8R4P5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Tmc1Q8R4P5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Tmc1Q8R4P5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Tmc1Q8R4P5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.78■■□□□ 1.56
Tmc1Q8R4P5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Tmc1Q8R4P5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Tmc1Q8R4P5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Tmc1Q8R4P5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Tmc1Q8R4P5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Tmc1Q8R4P5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Tmc1Q8R4P5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Tmc1Q8R4P5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Tmc1Q8R4P5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.77■■□□□ 1.56
Tmc1Q8R4P5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms