Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Gm26571-201ENSMUST00000181399 666 ntBASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tdp1Q8BJ37 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Smad6-203ENSMUST00000179458 273 ntBASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tdp1Q8BJ37 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Tdp1Q8BJ37 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tdp1Q8BJ37 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.6■■□□□ 1.21
Tdp1Q8BJ37 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Tdp1Q8BJ37 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
Tdp1Q8BJ37 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.6■■□□□ 1.21
Tdp1Q8BJ37 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.59■■□□□ 1.21
Tdp1Q8BJ37 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Gm7291-201ENSMUST00000199147 382 ntBASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tdp1Q8BJ37 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.57■■□□□ 1.2
Tdp1Q8BJ37 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.57■■□□□ 1.2
Tdp1Q8BJ37 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tdp1Q8BJ37 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.57■■□□□ 1.2
Tdp1Q8BJ37 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tdp1Q8BJ37 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tdp1Q8BJ37 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tdp1Q8BJ37 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tdp1Q8BJ37 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tdp1Q8BJ37 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tdp1Q8BJ37 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Gm42642-201ENSMUST00000200683 355 ntBASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Tdp1Q8BJ37 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms