Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp8Q80U87 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp8Q80U87 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.27■□□□□ 0.84
Usp8Q80U87 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp8Q80U87 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp8Q80U87 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp8Q80U87 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp8Q80U87 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.27■□□□□ 0.84
Usp8Q80U87 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp8Q80U87 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp8Q80U87 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp8Q80U87 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Usp8Q80U87 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp8Q80U87 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Usp8Q80U87 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp8Q80U87 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp8Q80U87 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.25■□□□□ 0.83
Usp8Q80U87 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.25■□□□□ 0.83
Usp8Q80U87 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp8Q80U87 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp8Q80U87 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp8Q80U87 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp8Q80U87 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp8Q80U87 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp8Q80U87 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
Usp8Q80U87 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp8Q80U87 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp8Q80U87 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp8Q80U87 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp8Q80U87 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp8Q80U87 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp8Q80U87 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp8Q80U87 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Usp8Q80U87 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp8Q80U87 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp8Q80U87 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp8Q80U87 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp8Q80U87 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp8Q80U87 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp8Q80U87 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp8Q80U87 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp8Q80U87 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp8Q80U87 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp8Q80U87 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp8Q80U87 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Usp8Q80U87 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp8Q80U87 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
Usp8Q80U87 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp8Q80U87 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp8Q80U87 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp8Q80U87 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp8Q80U87 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp8Q80U87 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Usp8Q80U87 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Usp8Q80U87 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp8Q80U87 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp8Q80U87 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp8Q80U87 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.19■□□□□ 0.82
Usp8Q80U87 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp8Q80U87 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp8Q80U87 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.19■□□□□ 0.82
Usp8Q80U87 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp8Q80U87 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp8Q80U87 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp8Q80U87 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp8Q80U87 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp8Q80U87 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp8Q80U87 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp8Q80U87 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.18■□□□□ 0.82
Usp8Q80U87 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Usp8Q80U87 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp8Q80U87 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Usp8Q80U87 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms