Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cachd1Q6PDJ1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cachd1Q6PDJ1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cachd1Q6PDJ1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cachd1Q6PDJ1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.57■□□□□ 0.88
Cachd1Q6PDJ1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cachd1Q6PDJ1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Smad6-203ENSMUST00000179458 273 ntBASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.55■□□□□ 0.88
Cachd1Q6PDJ1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.54■□□□□ 0.88
Cachd1Q6PDJ1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cachd1Q6PDJ1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cachd1Q6PDJ1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cachd1Q6PDJ1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cachd1Q6PDJ1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cachd1Q6PDJ1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cachd1Q6PDJ1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.87
Cachd1Q6PDJ1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cachd1Q6PDJ1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cachd1Q6PDJ1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cachd1Q6PDJ1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cachd1Q6PDJ1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms