Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.54■□□□□ 0.4
Atf6bO35451 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.54■□□□□ 0.4
Atf6bO35451 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atf6bO35451 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atf6bO35451 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.54■□□□□ 0.4
Atf6bO35451 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.53■□□□□ 0.4
Atf6bO35451 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atf6bO35451 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atf6bO35451 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.52■□□□□ 0.4
Atf6bO35451 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf6bO35451 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf6bO35451 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.52■□□□□ 0.4
Atf6bO35451 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf6bO35451 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atf6bO35451 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf6bO35451 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf6bO35451 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atf6bO35451 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6bO35451 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6bO35451 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.51■□□□□ 0.39
Atf6bO35451 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6bO35451 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
Atf6bO35451 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.51■□□□□ 0.39
Atf6bO35451 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6bO35451 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6bO35451 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.5■□□□□ 0.39
Atf6bO35451 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6bO35451 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6bO35451 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6bO35451 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6bO35451 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6bO35451 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6bO35451 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6bO35451 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6bO35451 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6bO35451 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6bO35451 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6bO35451 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.49■□□□□ 0.39
Atf6bO35451 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
Atf6bO35451 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6bO35451 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6bO35451 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.48■□□□□ 0.39
Atf6bO35451 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6bO35451 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6bO35451 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6bO35451 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6bO35451 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.48■□□□□ 0.39
Atf6bO35451 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6bO35451 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6bO35451 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6bO35451 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6bO35451 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6bO35451 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6bO35451 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6bO35451 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Atf6bO35451 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Atf6bO35451 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6bO35451 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Atf6bO35451 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6bO35451 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Atf6bO35451 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Atf6bO35451 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6bO35451 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6bO35451 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6bO35451 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.46■□□□□ 0.39
Atf6bO35451 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6bO35451 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.46■□□□□ 0.39
Atf6bO35451 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.46■□□□□ 0.39
Atf6bO35451 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6bO35451 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6bO35451 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6bO35451 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.46■□□□□ 0.39
Atf6bO35451 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Atf6bO35451 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Atf6bO35451 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms