Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rnf213E9Q555 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC10.1□□□□□ -0.79
Rnf213E9Q555 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf213E9Q555 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf213E9Q555 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf213E9Q555 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rnf213E9Q555 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC10.09□□□□□ -0.79
Rnf213E9Q555 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf213E9Q555 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf213E9Q555 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rnf213E9Q555 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.09□□□□□ -0.79
Rnf213E9Q555 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf213E9Q555 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Rnf213E9Q555 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Gm3807-201ENSMUST00000193520 1168 ntBASIC10.08□□□□□ -0.8
Rnf213E9Q555 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC10.08□□□□□ -0.8
Rnf213E9Q555 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Gm9988-201ENSMUST00000069786 435 ntBASIC10.07□□□□□ -0.8
Rnf213E9Q555 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Rnf213E9Q555 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Gm5408-201ENSMUST00000197998 747 ntBASIC10.07□□□□□ -0.8
Rnf213E9Q555 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf213E9Q555 Gm27045-201ENSMUST00000182145 1402 ntBASIC10.07□□□□□ -0.8
Rnf213E9Q555 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.06□□□□□ -0.8
Rnf213E9Q555 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.06□□□□□ -0.8
Rnf213E9Q555 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC10.06□□□□□ -0.8
Rnf213E9Q555 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.06□□□□□ -0.8
Rnf213E9Q555 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rnf213E9Q555 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms