Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Herc1E9PZP8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.84□□□□□ -0.51
Herc1E9PZP8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Gm6420-201ENSMUST00000193885 723 ntBASIC11.84□□□□□ -0.51
Herc1E9PZP8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Herc1E9PZP8 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.83□□□□□ -0.51
Herc1E9PZP8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Herc1E9PZP8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Herc1E9PZP8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.83□□□□□ -0.52
Herc1E9PZP8 Gm7367-201ENSMUST00000057611 492 ntBASIC11.83□□□□□ -0.52
Herc1E9PZP8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Herc1E9PZP8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Gm6576-201ENSMUST00000169678 883 ntBASIC11.82□□□□□ -0.52
Herc1E9PZP8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Gm10231-201ENSMUST00000181584 441 ntBASIC11.82□□□□□ -0.52
Herc1E9PZP8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Gm10175-202ENSMUST00000208752 441 ntBASIC11.82□□□□□ -0.52
Herc1E9PZP8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Herc1E9PZP8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.81□□□□□ -0.52
Herc1E9PZP8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Herc1E9PZP8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Herc1E9PZP8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Herc1E9PZP8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.81□□□□□ -0.52
Herc1E9PZP8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Herc1E9PZP8 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.81□□□□□ -0.52
Herc1E9PZP8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Herc1E9PZP8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC11.81□□□□□ -0.52
Herc1E9PZP8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC11.8□□□□□ -0.52
Herc1E9PZP8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.8□□□□□ -0.52
Herc1E9PZP8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Herc1E9PZP8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Herc1E9PZP8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Herc1E9PZP8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Herc1E9PZP8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC11.79□□□□□ -0.52
Herc1E9PZP8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Herc1E9PZP8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.79□□□□□ -0.52
Herc1E9PZP8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Herc1E9PZP8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Herc1E9PZP8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.78□□□□□ -0.52
Herc1E9PZP8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Herc1E9PZP8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Herc1E9PZP8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.77□□□□□ -0.52
Herc1E9PZP8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.52
Herc1E9PZP8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Herc1E9PZP8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Herc1E9PZP8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC11.77□□□□□ -0.53
Herc1E9PZP8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.77□□□□□ -0.53
Herc1E9PZP8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.77□□□□□ -0.53
Herc1E9PZP8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms