Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.69■□□□□ 0.1
Col6a5A6H584 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col6a5A6H584 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Col6a5A6H584 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a5A6H584 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a5A6H584 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.68■□□□□ 0.1
Col6a5A6H584 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col6a5A6H584 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a5A6H584 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC15.68■□□□□ 0.1
Col6a5A6H584 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a5A6H584 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a5A6H584 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col6a5A6H584 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a5A6H584 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.68■□□□□ 0.1
Col6a5A6H584 Gm7514-201ENSMUST00000209475 934 ntBASIC15.68■□□□□ 0.1
Col6a5A6H584 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a5A6H584 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Col6a5A6H584 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.68■□□□□ 0.1
Col6a5A6H584 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col6a5A6H584 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a5A6H584 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a5A6H584 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a5A6H584 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a5A6H584 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a5A6H584 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Col6a5A6H584 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Gm10819-201ENSMUST00000099988 561 ntBASIC15.66■□□□□ 0.1
Col6a5A6H584 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.66■□□□□ 0.1
Col6a5A6H584 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col6a5A6H584 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.66■□□□□ 0.1
Col6a5A6H584 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a5A6H584 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.65■□□□□ 0.1
Col6a5A6H584 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col6a5A6H584 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col6a5A6H584 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col6a5A6H584 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a5A6H584 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col6a5A6H584 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
Col6a5A6H584 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Col6a5A6H584 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Col6a5A6H584 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Col6a5A6H584 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col6a5A6H584 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.64■□□□□ 0.09
Col6a5A6H584 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.64■□□□□ 0.09
Col6a5A6H584 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.64■□□□□ 0.09
Col6a5A6H584 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a5A6H584 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a5A6H584 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a5A6H584 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a5A6H584 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Col6a5A6H584 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a5A6H584 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col6a5A6H584 Trmt13-210ENSMUST00000198454 880 ntBASIC15.63■□□□□ 0.09
Col6a5A6H584 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a5A6H584 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a5A6H584 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col6a5A6H584 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col6a5A6H584 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a5A6H584 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a5A6H584 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.62■□□□□ 0.09
Col6a5A6H584 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.62■□□□□ 0.09
Col6a5A6H584 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a5A6H584 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a5A6H584 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col6a5A6H584 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a5A6H584 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col6a5A6H584 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a5A6H584 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a5A6H584 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a5A6H584 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a5A6H584 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col6a5A6H584 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a5A6H584 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.61■□□□□ 0.09
Col6a5A6H584 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.61■□□□□ 0.09
Col6a5A6H584 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.61■□□□□ 0.09
Col6a5A6H584 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a5A6H584 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.6■□□□□ 0.09
Col6a5A6H584 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Col6a5A6H584 Gm5408-201ENSMUST00000197998 747 ntBASIC15.6■□□□□ 0.09
Col6a5A6H584 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a5A6H584 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms