Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5921-201ENSMUST00000075898 882 ntBASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.85■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10399-202ENSMUST00000202768 748 ntBASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.83■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.8■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.8■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms