Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Gm9959-201ENSMUST00000068277 390 ntBASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-7A0A075B6B0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-7A0A075B6B0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-7A0A075B6B0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Iqck-206ENSMUST00000208658 2891 ntBASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-7A0A075B6B0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-7A0A075B6B0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6d-7A0A075B6B0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6d-7A0A075B6B0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6d-7A0A075B6B0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6d-7A0A075B6B0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6d-7A0A075B6B0 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.58■□□□□ 0.08
Trav6d-7A0A075B6B0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav6d-7A0A075B6B0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav6d-7A0A075B6B0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Trav6d-7A0A075B6B0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.58■□□□□ 0.08
Trav6d-7A0A075B6B0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-7A0A075B6B0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-7A0A075B6B0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-7A0A075B6B0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-7A0A075B6B0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-7A0A075B6B0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-7A0A075B6B0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav6d-7A0A075B6B0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-7A0A075B6B0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-7A0A075B6B0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Gm7417-201ENSMUST00000192950 473 ntBASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-7A0A075B6B0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-7A0A075B6B0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms