Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cdh17Q9R100 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh17Q9R100 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh17Q9R100 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh17Q9R100 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.98■□□□□ 0.79
Cdh17Q9R100 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh17Q9R100 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh17Q9R100 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh17Q9R100 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh17Q9R100 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh17Q9R100 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.98■□□□□ 0.79
Cdh17Q9R100 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh17Q9R100 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh17Q9R100 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Gm5921-201ENSMUST00000075898 882 ntBASIC19.97■□□□□ 0.79
Cdh17Q9R100 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh17Q9R100 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.96■□□□□ 0.79
Cdh17Q9R100 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh17Q9R100 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Cdh17Q9R100 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
Cdh17Q9R100 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh17Q9R100 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.94■□□□□ 0.78
Cdh17Q9R100 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh17Q9R100 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cdh17Q9R100 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.94■□□□□ 0.78
Cdh17Q9R100 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.94■□□□□ 0.78
Cdh17Q9R100 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.94■□□□□ 0.78
Cdh17Q9R100 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh17Q9R100 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh17Q9R100 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh17Q9R100 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh17Q9R100 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh17Q9R100 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh17Q9R100 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh17Q9R100 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.93■□□□□ 0.78
Cdh17Q9R100 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh17Q9R100 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh17Q9R100 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh17Q9R100 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh17Q9R100 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdh17Q9R100 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
Cdh17Q9R100 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh17Q9R100 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
Cdh17Q9R100 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cdh17Q9R100 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cdh17Q9R100 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh17Q9R100 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdh17Q9R100 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh17Q9R100 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh17Q9R100 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh17Q9R100 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh17Q9R100 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.91■□□□□ 0.78
Cdh17Q9R100 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh17Q9R100 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh17Q9R100 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh17Q9R100 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh17Q9R100 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh17Q9R100 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.9■□□□□ 0.78
Cdh17Q9R100 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh17Q9R100 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh17Q9R100 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh17Q9R100 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh17Q9R100 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.9■□□□□ 0.78
Cdh17Q9R100 Gm10399-202ENSMUST00000202768 748 ntBASIC19.89■□□□□ 0.77
Cdh17Q9R100 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh17Q9R100 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh17Q9R100 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh17Q9R100 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh17Q9R100 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh17Q9R100 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms