Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 SRB7YDR308C 423 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 OPI7YDR360W 435 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 SPT3YDR392W 1014 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 TLG1YDR468C 675 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 YEL008WYEL008W 381 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 EMC4YGL231C 573 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 YGR127WYGR127W 939 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 RRT14YIL127C 621 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 SRP102YKL154W 735 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 RPS0BYLR048W 759 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 GCD7YLR291C 1146 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 SNO4YMR322C 714 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 COX5AYNL052W 462 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 HSP33YOR391C 714 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 HSP32YPL280W 714 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 DAL4YIR028W 1908 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 THI22YPR121W 1719 nt5.85□□□□□ -1.47
TY1A-LR2P0CX72 RSA4YCR072C 1548 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 YIL001WYIL001W 1542 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 EMW1YNL313C 2715 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 TOS4YLR183C 1470 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 PRO2YOR323C 1371 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 TPO3YPR156C 1869 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 CTH1YDR151C 978 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 ATC1YDR184C 885 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 SUF3tG(CCC)D 72 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 YGR026WYGR026W 837 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 THR1YHR025W 1074 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 ICS3YJL077C 396 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 PMU1YKL128C 888 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 HUT1YPL244C 1020 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 SPP381YBR152W 876 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 VHT1YGR065C 1782 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 ERO1YML130C 1692 nt5.84□□□□□ -1.47
TY1A-LR2P0CX72 KTR5YNL029C 1569 nt5.84□□□□□ -1.48
TY1A-LR2P0CX72 HXK2YGL253W 1461 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 MFG1YDL233W 1377 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 ESC8YOL017W 2145 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 YIL067CYIL067C 2037 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 YCR108CYCR108C 192 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 SPR28YDR218C 1272 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 YEL010WYEL010W 351 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 DAM1YGR113W 1032 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 YJL144WYJL144W 315 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 YJR142WYJR142W 1029 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 YBL070CYBL070C 321 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 AIM39YOL053W 1188 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 RDL2YOR286W 450 nt5.83□□□□□ -1.48
TY1A-LR2P0CX72 YPK2YMR104C 2034 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 IFM1YOL023W 2031 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 ZRC1YMR243C 1329 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 YDL016CYDL016C 303 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 PDS1YDR113C 1122 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 HPT1YDR399W 666 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 YFR034W-AYFR034W-A 288 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 COS9YKL219W 1224 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 YMR085WYMR085W 1299 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 ATP23YNR020C 813 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 SER1YOR184W 1188 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 PNG1YPL096W 1092 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 STB5YHR178W 2232 nt5.82□□□□□ -1.48
TY1A-LR2P0CX72 YFL040WYFL040W 1623 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 PPM1YDR435C 987 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 YGR079WYGR079W 1113 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 THI4YGR144W 981 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 FUN14YAL008W 597 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 APQ13YJL075C 417 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 QRI5YLR204W 336 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 SFH1YLR321C 1281 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 YML6YML025C 861 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 GTO3YMR251W 1101 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 YNL013CYNL013C 378 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 TOS6YNL300W 309 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 MDY2YOL111C 639 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 VMA4YOR332W 702 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 YPL199CYPL199C 723 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 PNS1YOR161C 1620 nt5.81□□□□□ -1.48
TY1A-LR2P0CX72 SPT14YPL175W 1359 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 MSS1YMR023C 1581 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 SPS1YDR523C 1473 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 MEI4YER044C-A 1227 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 SPT15YER148W 723 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 YGL117WYGL117W 798 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 PEX21YGR239C 867 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 FLX1YIL134W 936 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 YAL069WYAL069W 315 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 DUS4YLR405W 1104 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 SHE1YBL031W 1017 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 YMR187CYMR187C 1296 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 TRI1YMR233W 681 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 AAD14YNL331C 1131 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 YBL096CYBL096C 309 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 GAL7YBR018C 1101 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 LSP1YPL004C 1026 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 YPL162CYPL162C 822 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 SCD6YPR129W 1050 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 SAS10YDL153C 1833 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 YHR177WYHR177W 1362 nt5.8□□□□□ -1.48
TY1A-LR2P0CX72 TAF8YML114C 1533 nt5.79□□□□□ -1.48
TY1A-LR2P0CX72 YFR009W-AYFR009W-A 258 nt5.79□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 142.6 ms