Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atn1O35126 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Atn1O35126 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.96■□□□□ 0.79
Atn1O35126 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atn1O35126 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Atn1O35126 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atn1O35126 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Atn1O35126 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atn1O35126 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atn1O35126 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Atn1O35126 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atn1O35126 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atn1O35126 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atn1O35126 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atn1O35126 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Atn1O35126 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atn1O35126 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atn1O35126 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.94■□□□□ 0.78
Atn1O35126 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Atn1O35126 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Atn1O35126 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atn1O35126 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Atn1O35126 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Atn1O35126 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Atn1O35126 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.93■□□□□ 0.78
Atn1O35126 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Atn1O35126 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atn1O35126 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.92■□□□□ 0.78
Atn1O35126 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.92■□□□□ 0.78
Atn1O35126 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.92■□□□□ 0.78
Atn1O35126 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Atn1O35126 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.92■□□□□ 0.78
Atn1O35126 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.92■□□□□ 0.78
Atn1O35126 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Atn1O35126 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atn1O35126 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Atn1O35126 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.91■□□□□ 0.78
Atn1O35126 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Atn1O35126 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atn1O35126 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atn1O35126 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atn1O35126 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atn1O35126 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atn1O35126 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.91■□□□□ 0.78
Atn1O35126 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atn1O35126 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Atn1O35126 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atn1O35126 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atn1O35126 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atn1O35126 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Atn1O35126 Gm45444-201ENSMUST00000211394 898 ntBASIC19.9■□□□□ 0.78
Atn1O35126 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atn1O35126 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atn1O35126 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Atn1O35126 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atn1O35126 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atn1O35126 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atn1O35126 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Atn1O35126 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Atn1O35126 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Atn1O35126 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.89■□□□□ 0.77
Atn1O35126 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atn1O35126 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.89■□□□□ 0.77
Atn1O35126 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Atn1O35126 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Atn1O35126 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atn1O35126 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atn1O35126 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atn1O35126 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atn1O35126 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atn1O35126 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atn1O35126 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Atn1O35126 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atn1O35126 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Atn1O35126 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Atn1O35126 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atn1O35126 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Atn1O35126 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atn1O35126 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atn1O35126 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atn1O35126 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atn1O35126 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms