Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav17A0A075B655 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.2■□□□□ 0.18
Trav17A0A075B655 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav17A0A075B655 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.19■□□□□ 0.18
Trav17A0A075B655 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav17A0A075B655 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.18■□□□□ 0.18
Trav17A0A075B655 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav17A0A075B655 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav17A0A075B655 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav17A0A075B655 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav17A0A075B655 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav17A0A075B655 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav17A0A075B655 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.17■□□□□ 0.18
Trav17A0A075B655 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav17A0A075B655 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav17A0A075B655 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav17A0A075B655 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav17A0A075B655 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav17A0A075B655 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Trav17A0A075B655 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav17A0A075B655 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav17A0A075B655 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav17A0A075B655 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav17A0A075B655 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav17A0A075B655 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav17A0A075B655 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav17A0A075B655 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav17A0A075B655 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav17A0A075B655 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav17A0A075B655 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.13■□□□□ 0.17
Trav17A0A075B655 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms