Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav7d-3Q5R1I1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav7d-3Q5R1I1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7d-3Q5R1I1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7d-3Q5R1I1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7d-3Q5R1I1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7d-3Q5R1I1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-3Q5R1I1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav7d-3Q5R1I1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav7d-3Q5R1I1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav7d-3Q5R1I1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav7d-3Q5R1I1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.96□□□□□ -0.02
Trav7d-3Q5R1I1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav7d-3Q5R1I1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms