Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.79■■□□□ 1.08
Trim43aQ3TL54 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43aQ3TL54 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43aQ3TL54 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43aQ3TL54 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim43aQ3TL54 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim43aQ3TL54 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43aQ3TL54 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43aQ3TL54 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43aQ3TL54 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43aQ3TL54 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim43aQ3TL54 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.78■■□□□ 1.08
Trim43aQ3TL54 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43aQ3TL54 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim43aQ3TL54 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Gm10420-201ENSMUST00000121713 882 ntBASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim43aQ3TL54 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.77■■□□□ 1.07
Trim43aQ3TL54 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim43aQ3TL54 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim43aQ3TL54 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim43aQ3TL54 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim43aQ3TL54 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim43aQ3TL54 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim43aQ3TL54 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.76■■□□□ 1.07
Trim43aQ3TL54 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Trim43aQ3TL54 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.76■■□□□ 1.07
Trim43aQ3TL54 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim43aQ3TL54 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Golph3-202ENSMUST00000226517 2359 ntBASIC21.74■■□□□ 1.07
Trim43aQ3TL54 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim43aQ3TL54 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43aQ3TL54 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43aQ3TL54 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43aQ3TL54 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43aQ3TL54 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43aQ3TL54 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43aQ3TL54 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trim43aQ3TL54 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim43aQ3TL54 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim43aQ3TL54 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.72■■□□□ 1.07
Trim43aQ3TL54 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim43aQ3TL54 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim43aQ3TL54 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim43aQ3TL54 Iqck-206ENSMUST00000208658 2891 ntBASIC21.71■■□□□ 1.07
Trim43aQ3TL54 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim43aQ3TL54 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim43aQ3TL54 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trim43aQ3TL54 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim43aQ3TL54 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim43aQ3TL54 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.71■■□□□ 1.07
Trim43aQ3TL54 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Trim43aQ3TL54 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.7■■□□□ 1.06
Trim43aQ3TL54 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.7■■□□□ 1.06
Trim43aQ3TL54 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43aQ3TL54 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43aQ3TL54 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim43aQ3TL54 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43aQ3TL54 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim43aQ3TL54 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trim43aQ3TL54 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim43aQ3TL54 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim43aQ3TL54 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim43aQ3TL54 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms