Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim63Q38HM4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim63Q38HM4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim63Q38HM4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim63Q38HM4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim63Q38HM4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim63Q38HM4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim63Q38HM4 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.02■□□□□ 0.31
Trim63Q38HM4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim63Q38HM4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim63Q38HM4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim63Q38HM4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim63Q38HM4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim63Q38HM4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim63Q38HM4 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.01■□□□□ 0.31
Trim63Q38HM4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim63Q38HM4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim63Q38HM4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.99■□□□□ 0.31
Trim63Q38HM4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.99■□□□□ 0.31
Trim63Q38HM4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim63Q38HM4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim63Q38HM4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim63Q38HM4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trim63Q38HM4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.96■□□□□ 0.3
Trim63Q38HM4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trim63Q38HM4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim63Q38HM4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim63Q38HM4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim63Q38HM4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim63Q38HM4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms