Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6bO35451 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.74■□□□□ 0.43
Atf6bO35451 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6bO35451 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6bO35451 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atf6bO35451 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.74■□□□□ 0.43
Atf6bO35451 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6bO35451 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6bO35451 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6bO35451 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Atf6bO35451 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6bO35451 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atf6bO35451 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6bO35451 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6bO35451 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Atf6bO35451 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6bO35451 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6bO35451 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6bO35451 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.72■□□□□ 0.43
Atf6bO35451 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atf6bO35451 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6bO35451 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Atf6bO35451 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.71■□□□□ 0.43
Atf6bO35451 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6bO35451 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Atf6bO35451 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atf6bO35451 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Atf6bO35451 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Atf6bO35451 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6bO35451 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6bO35451 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6bO35451 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.7■□□□□ 0.42
Atf6bO35451 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.7■□□□□ 0.42
Atf6bO35451 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6bO35451 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6bO35451 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf6bO35451 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6bO35451 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6bO35451 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6bO35451 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6bO35451 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6bO35451 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6bO35451 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Atf6bO35451 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6bO35451 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Atf6bO35451 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6bO35451 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.68■□□□□ 0.42
Atf6bO35451 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6bO35451 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6bO35451 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6bO35451 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6bO35451 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Atf6bO35451 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Atf6bO35451 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Atf6bO35451 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.67■□□□□ 0.42
Atf6bO35451 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Atf6bO35451 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6bO35451 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6bO35451 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6bO35451 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Atf6bO35451 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6bO35451 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Atf6bO35451 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6bO35451 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6bO35451 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6bO35451 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6bO35451 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Atf6bO35451 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6bO35451 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.65■□□□□ 0.42
Atf6bO35451 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6bO35451 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atf6bO35451 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6bO35451 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.65■□□□□ 0.42
Atf6bO35451 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.65■□□□□ 0.42
Atf6bO35451 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.65■□□□□ 0.42
Atf6bO35451 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6bO35451 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atf6bO35451 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6bO35451 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Atf6bO35451 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6bO35451 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atf6bO35451 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atf6bO35451 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6bO35451 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6bO35451 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6bO35451 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6bO35451 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.64■□□□□ 0.41
Atf6bO35451 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6bO35451 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Atf6bO35451 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6bO35451 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6bO35451 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms