Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps1O08983 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps1O08983 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps1O08983 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hps1O08983 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hps1O08983 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Hps1O08983 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hps1O08983 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hps1O08983 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hps1O08983 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hps1O08983 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hps1O08983 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hps1O08983 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.83■□□□□ 0.61
Hps1O08983 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.83■□□□□ 0.6
Hps1O08983 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps1O08983 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps1O08983 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps1O08983 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hps1O08983 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps1O08983 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps1O08983 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hps1O08983 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps1O08983 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Hps1O08983 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps1O08983 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Hps1O08983 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps1O08983 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps1O08983 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps1O08983 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps1O08983 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.82■□□□□ 0.6
Hps1O08983 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps1O08983 Gm9959-201ENSMUST00000068277 390 ntBASIC18.82■□□□□ 0.6
Hps1O08983 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hps1O08983 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps1O08983 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps1O08983 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps1O08983 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.81■□□□□ 0.6
Hps1O08983 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hps1O08983 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps1O08983 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.81■□□□□ 0.6
Hps1O08983 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps1O08983 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.81■□□□□ 0.6
Hps1O08983 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps1O08983 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hps1O08983 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps1O08983 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hps1O08983 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hps1O08983 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps1O08983 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hps1O08983 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hps1O08983 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.8■□□□□ 0.6
Hps1O08983 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps1O08983 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hps1O08983 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps1O08983 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hps1O08983 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hps1O08983 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hps1O08983 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hps1O08983 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hps1O08983 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.79■□□□□ 0.6
Hps1O08983 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hps1O08983 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hps1O08983 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps1O08983 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps1O08983 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps1O08983 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps1O08983 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.78■□□□□ 0.6
Hps1O08983 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps1O08983 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps1O08983 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps1O08983 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hps1O08983 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hps1O08983 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps1O08983 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps1O08983 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hps1O08983 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps1O08983 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps1O08983 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps1O08983 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hps1O08983 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps1O08983 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.77■□□□□ 0.59
Hps1O08983 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hps1O08983 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hps1O08983 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps1O08983 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps1O08983 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.76■□□□□ 0.59
Hps1O08983 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps1O08983 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.76■□□□□ 0.59
Hps1O08983 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps1O08983 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hps1O08983 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hps1O08983 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps1O08983 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps1O08983 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps1O08983 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps1O08983 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps1O08983 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.75■□□□□ 0.59
Hps1O08983 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps1O08983 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps1O08983 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms