Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Gm43173-201ENSMUST00000202246 593 ntBASIC24.98■■□□□ 1.59
Ube4aE9Q735 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ube4aE9Q735 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.97■■□□□ 1.59
Ube4aE9Q735 Gm12251-201ENSMUST00000117893 792 ntBASIC24.97■■□□□ 1.59
Ube4aE9Q735 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.97■■□□□ 1.59
Ube4aE9Q735 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.97■■□□□ 1.59
Ube4aE9Q735 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.97■■□□□ 1.59
Ube4aE9Q735 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.97■■□□□ 1.59
Ube4aE9Q735 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ube4aE9Q735 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Gm18284-201ENSMUST00000172604 624 ntBASIC24.96■■□□□ 1.59
Ube4aE9Q735 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Gm8495-201ENSMUST00000188740 694 ntBASIC24.96■■□□□ 1.59
Ube4aE9Q735 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Ube4aE9Q735 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ube4aE9Q735 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.95■■□□□ 1.58
Ube4aE9Q735 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ube4aE9Q735 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ube4aE9Q735 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ube4aE9Q735 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Ube4aE9Q735 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ube4aE9Q735 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ube4aE9Q735 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ube4aE9Q735 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ube4aE9Q735 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.94■■□□□ 1.58
Ube4aE9Q735 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ube4aE9Q735 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Ube4aE9Q735 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ube4aE9Q735 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ube4aE9Q735 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.94■■□□□ 1.58
Ube4aE9Q735 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
Ube4aE9Q735 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ube4aE9Q735 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.93■■□□□ 1.58
Ube4aE9Q735 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ube4aE9Q735 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ube4aE9Q735 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Ube4aE9Q735 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ube4aE9Q735 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Ube4aE9Q735 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ube4aE9Q735 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ube4aE9Q735 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ube4aE9Q735 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.91■■□□□ 1.58
Ube4aE9Q735 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ube4aE9Q735 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ube4aE9Q735 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ube4aE9Q735 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.91■■□□□ 1.58
Ube4aE9Q735 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.91■■□□□ 1.58
Ube4aE9Q735 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ube4aE9Q735 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ube4aE9Q735 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ube4aE9Q735 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Ube4aE9Q735 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.9■■□□□ 1.58
Ube4aE9Q735 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.9■■□□□ 1.58
Ube4aE9Q735 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Ube4aE9Q735 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Ube4aE9Q735 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ube4aE9Q735 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ube4aE9Q735 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ube4aE9Q735 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ube4aE9Q735 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ube4aE9Q735 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.89■■□□□ 1.58
Ube4aE9Q735 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ube4aE9Q735 Spcs1-204ENSMUST00000226782 949 ntBASIC24.89■■□□□ 1.58
Ube4aE9Q735 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ube4aE9Q735 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Ube4aE9Q735 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ube4aE9Q735 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ube4aE9Q735 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ube4aE9Q735 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC24.88■■□□□ 1.57
Ube4aE9Q735 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ube4aE9Q735 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ube4aE9Q735 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.88■■□□□ 1.57
Ube4aE9Q735 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ube4aE9Q735 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ube4aE9Q735 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Ube4aE9Q735 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.87■■□□□ 1.57
Ube4aE9Q735 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ube4aE9Q735 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Ube4aE9Q735 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ube4aE9Q735 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ube4aE9Q735 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ube4aE9Q735 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Ube4aE9Q735 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.86■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms