Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.08■□□□□ 0.65
Ighv1-42A0A0A6YY38 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-42A0A0A6YY38 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-42A0A0A6YY38 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ighv1-42A0A0A6YY38 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-42A0A0A6YY38 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-42A0A0A6YY38 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.07■□□□□ 0.64
Ighv1-42A0A0A6YY38 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-42A0A0A6YY38 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-42A0A0A6YY38 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ighv1-42A0A0A6YY38 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-42A0A0A6YY38 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.07■□□□□ 0.64
Ighv1-42A0A0A6YY38 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-42A0A0A6YY38 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gm8493-201ENSMUST00000196881 489 ntBASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-42A0A0A6YY38 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.03■□□□□ 0.64
Ighv1-42A0A0A6YY38 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ighv1-42A0A0A6YY38 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.03■□□□□ 0.64
Ighv1-42A0A0A6YY38 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-42A0A0A6YY38 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-42A0A0A6YY38 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ighv1-42A0A0A6YY38 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Ighv1-42A0A0A6YY38 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ighv1-42A0A0A6YY38 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ighv1-42A0A0A6YY38 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-42A0A0A6YY38 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.01■□□□□ 0.63
Ighv1-42A0A0A6YY38 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.01■□□□□ 0.63
Ighv1-42A0A0A6YY38 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-42A0A0A6YY38 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-42A0A0A6YY38 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-42A0A0A6YY38 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.01■□□□□ 0.63
Ighv1-42A0A0A6YY38 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-42A0A0A6YY38 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-42A0A0A6YY38 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-42A0A0A6YY38 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-42A0A0A6YY38 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-42A0A0A6YY38 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Ighv1-42A0A0A6YY38 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
Ighv1-42A0A0A6YY38 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-42A0A0A6YY38 Gm43017-201ENSMUST00000198296 752 ntBASIC19■□□□□ 0.63
Ighv1-42A0A0A6YY38 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms