Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav17A0A075B655 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav17A0A075B655 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav17A0A075B655 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav17A0A075B655 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav17A0A075B655 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav17A0A075B655 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trav17A0A075B655 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav17A0A075B655 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav17A0A075B655 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav17A0A075B655 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.25■□□□□ 0.19
Trav17A0A075B655 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav17A0A075B655 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav17A0A075B655 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav17A0A075B655 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav17A0A075B655 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav17A0A075B655 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.24■□□□□ 0.19
Trav17A0A075B655 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav17A0A075B655 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav17A0A075B655 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav17A0A075B655 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav17A0A075B655 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav17A0A075B655 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav17A0A075B655 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 817.2 ms