Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1S4R1E0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1S4R1E0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1S4R1E0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1S4R1E0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.61■□□□□ 0.57
H2afb1S4R1E0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
H2afb1S4R1E0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb1S4R1E0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb1S4R1E0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.6■□□□□ 0.57
H2afb1S4R1E0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb1S4R1E0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
H2afb1S4R1E0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb1S4R1E0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb1S4R1E0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1S4R1E0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.58■□□□□ 0.57
H2afb1S4R1E0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
H2afb1S4R1E0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
H2afb1S4R1E0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb1S4R1E0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb1S4R1E0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1S4R1E0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
H2afb1S4R1E0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1S4R1E0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1S4R1E0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1S4R1E0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.57■□□□□ 0.56
H2afb1S4R1E0 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.57■□□□□ 0.56
H2afb1S4R1E0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1S4R1E0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.55■□□□□ 0.56
H2afb1S4R1E0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb1S4R1E0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms