Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh23Q99PF4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh23Q99PF4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.61■■□□□ 1.05
Cdh23Q99PF4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.6■■□□□ 1.05
Cdh23Q99PF4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh23Q99PF4 Gm40848-201ENSMUST00000221998 324 ntBASIC21.6■■□□□ 1.05
Cdh23Q99PF4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh23Q99PF4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh23Q99PF4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.6■■□□□ 1.05
Cdh23Q99PF4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cdh23Q99PF4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.6■■□□□ 1.05
Cdh23Q99PF4 Nespas-201ENSMUST00000143738 1083 ntBASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Gm10252-201ENSMUST00000209541 832 ntBASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Gm26833-201ENSMUST00000180899 440 ntBASIC21.59■■□□□ 1.05
Cdh23Q99PF4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh23Q99PF4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh23Q99PF4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh23Q99PF4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh23Q99PF4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh23Q99PF4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.57■■□□□ 1.04
Cdh23Q99PF4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh23Q99PF4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.57■■□□□ 1.04
Cdh23Q99PF4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh23Q99PF4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.57■■□□□ 1.04
Cdh23Q99PF4 AV356131-201ENSMUST00000206201 750 ntBASIC21.57■■□□□ 1.04
Cdh23Q99PF4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh23Q99PF4 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.57■■□□□ 1.04
Cdh23Q99PF4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.56■■□□□ 1.04
Cdh23Q99PF4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.56■■□□□ 1.04
Cdh23Q99PF4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh23Q99PF4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh23Q99PF4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh23Q99PF4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh23Q99PF4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh23Q99PF4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh23Q99PF4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.56■■□□□ 1.04
Cdh23Q99PF4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh23Q99PF4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.55■■□□□ 1.04
Cdh23Q99PF4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh23Q99PF4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh23Q99PF4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
Cdh23Q99PF4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh23Q99PF4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh23Q99PF4 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.54■■□□□ 1.04
Cdh23Q99PF4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh23Q99PF4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh23Q99PF4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh23Q99PF4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh23Q99PF4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.53■■□□□ 1.04
Cdh23Q99PF4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdh23Q99PF4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cdh23Q99PF4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh23Q99PF4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh23Q99PF4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh23Q99PF4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh23Q99PF4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh23Q99PF4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Cdh23Q99PF4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.52■■□□□ 1.04
Cdh23Q99PF4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cdh23Q99PF4 Gm12933-201ENSMUST00000120203 872 ntBASIC21.51■■□□□ 1.03
Cdh23Q99PF4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh23Q99PF4 Gm22325-201ENSMUST00000158904 308 ntBASIC21.51■■□□□ 1.03
Cdh23Q99PF4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh23Q99PF4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh23Q99PF4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.5■■□□□ 1.03
Cdh23Q99PF4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdh23Q99PF4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Cdh23Q99PF4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdh23Q99PF4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.49■■□□□ 1.03
Cdh23Q99PF4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdh23Q99PF4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 187.2 ms