Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Smc4Q8CG47 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc4Q8CG47 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Gm9207-201ENSMUST00000198773 1115 ntBASIC25.54■■□□□ 1.68
Smc4Q8CG47 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc4Q8CG47 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Smc4Q8CG47 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Smc4Q8CG47 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
Smc4Q8CG47 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.53■■□□□ 1.68
Smc4Q8CG47 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.52■■□□□ 1.68
Smc4Q8CG47 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Smc4Q8CG47 Gm10657-201ENSMUST00000193528 1031 ntBASIC25.52■■□□□ 1.68
Smc4Q8CG47 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Smc4Q8CG47 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Smc4Q8CG47 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
Smc4Q8CG47 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Smc4Q8CG47 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Smc4Q8CG47 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Smc4Q8CG47 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Smc4Q8CG47 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Smc4Q8CG47 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc4Q8CG47 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
Smc4Q8CG47 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Smc4Q8CG47 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc4Q8CG47 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Smc4Q8CG47 Gm43403-201ENSMUST00000198011 1786 ntBASIC25.49■■□□□ 1.67
Smc4Q8CG47 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smc4Q8CG47 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Smc4Q8CG47 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smc4Q8CG47 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Smc4Q8CG47 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smc4Q8CG47 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.49■■□□□ 1.67
Smc4Q8CG47 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smc4Q8CG47 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC25.48■■□□□ 1.67
Smc4Q8CG47 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc4Q8CG47 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc4Q8CG47 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Smc4Q8CG47 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Smc4Q8CG47 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Krt8-ps-201ENSMUST00000208495 945 ntBASIC25.47■■□□□ 1.67
Smc4Q8CG47 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc4Q8CG47 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Smc4Q8CG47 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Smc4Q8CG47 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Smc4Q8CG47 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.46■■□□□ 1.67
Smc4Q8CG47 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Smc4Q8CG47 Gm27454-201ENSMUST00000185090 204 ntBASIC25.46■■□□□ 1.67
Smc4Q8CG47 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.46■■□□□ 1.67
Smc4Q8CG47 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Smc4Q8CG47 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Smc4Q8CG47 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Smc4Q8CG47 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Smc4Q8CG47 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.44■■□□□ 1.66
Smc4Q8CG47 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Smc4Q8CG47 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc4Q8CG47 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Smc4Q8CG47 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC25.42■■□□□ 1.66
Smc4Q8CG47 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smc4Q8CG47 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Smc4Q8CG47 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Smc4Q8CG47 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC25.42■■□□□ 1.66
Smc4Q8CG47 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smc4Q8CG47 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smc4Q8CG47 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms