Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Aph1bQ8C7N7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Aph1bQ8C7N7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Aph1bQ8C7N7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.54■□□□□ 0.88
Aph1bQ8C7N7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Aph1bQ8C7N7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1bQ8C7N7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aph1bQ8C7N7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aph1bQ8C7N7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aph1bQ8C7N7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.52■□□□□ 0.88
Aph1bQ8C7N7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aph1bQ8C7N7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Aph1bQ8C7N7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Aph1bQ8C7N7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Aph1bQ8C7N7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aph1bQ8C7N7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aph1bQ8C7N7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aph1bQ8C7N7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.49■□□□□ 0.87
Aph1bQ8C7N7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aph1bQ8C7N7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aph1bQ8C7N7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aph1bQ8C7N7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1bQ8C7N7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Cap2-205ENSMUST00000225824 1634 ntBASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1bQ8C7N7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aph1bQ8C7N7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Aph1bQ8C7N7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aph1bQ8C7N7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.46■□□□□ 0.87
Aph1bQ8C7N7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Aph1bQ8C7N7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aph1bQ8C7N7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aph1bQ8C7N7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aph1bQ8C7N7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms