Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Smim4Q8C1Q6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim4Q8C1Q6 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.24■□□□□ 0.35
Smim4Q8C1Q6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim4Q8C1Q6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim4Q8C1Q6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim4Q8C1Q6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smim4Q8C1Q6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim4Q8C1Q6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Smim4Q8C1Q6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smim4Q8C1Q6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smim4Q8C1Q6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.21■□□□□ 0.35
Smim4Q8C1Q6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim4Q8C1Q6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim4Q8C1Q6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim4Q8C1Q6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim4Q8C1Q6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim4Q8C1Q6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim4Q8C1Q6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smim4Q8C1Q6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smim4Q8C1Q6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smim4Q8C1Q6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Smim4Q8C1Q6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim4Q8C1Q6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim4Q8C1Q6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smim4Q8C1Q6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim4Q8C1Q6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smim4Q8C1Q6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim4Q8C1Q6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim4Q8C1Q6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim4Q8C1Q6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smim4Q8C1Q6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim4Q8C1Q6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smim4Q8C1Q6 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.17■□□□□ 0.34
Smim4Q8C1Q6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.17■□□□□ 0.34
Smim4Q8C1Q6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.17■□□□□ 0.34
Smim4Q8C1Q6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim4Q8C1Q6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Notumos-201ENSMUST00000151998 2659 ntBASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms