Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3hc1Q80YV2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3hc1Q80YV2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3hc1Q80YV2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3hc1Q80YV2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3hc1Q80YV2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3hc1Q80YV2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3hc1Q80YV2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3hc1Q80YV2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zc3hc1Q80YV2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zc3hc1Q80YV2 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.83■□□□□ 0.6
Zc3hc1Q80YV2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3hc1Q80YV2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3hc1Q80YV2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3hc1Q80YV2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3hc1Q80YV2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3hc1Q80YV2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3hc1Q80YV2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3hc1Q80YV2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3hc1Q80YV2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.81■□□□□ 0.6
Zc3hc1Q80YV2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3hc1Q80YV2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3hc1Q80YV2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zc3hc1Q80YV2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms