Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Iqck-206ENSMUST00000208658 2891 ntBASIC20.96■□□□□ 0.95
Cnga4Q3UW12 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cnga4Q3UW12 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cnga4Q3UW12 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cnga4Q3UW12 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cnga4Q3UW12 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cnga4Q3UW12 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cnga4Q3UW12 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
Cnga4Q3UW12 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Cnga4Q3UW12 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.92■□□□□ 0.94
Cnga4Q3UW12 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.92■□□□□ 0.94
Cnga4Q3UW12 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cnga4Q3UW12 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Cnga4Q3UW12 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cnga4Q3UW12 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnga4Q3UW12 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnga4Q3UW12 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnga4Q3UW12 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnga4Q3UW12 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnga4Q3UW12 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnga4Q3UW12 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cnga4Q3UW12 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cnga4Q3UW12 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cnga4Q3UW12 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.9■□□□□ 0.94
Cnga4Q3UW12 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cnga4Q3UW12 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cnga4Q3UW12 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.9■□□□□ 0.94
Cnga4Q3UW12 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.89■□□□□ 0.94
Cnga4Q3UW12 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cnga4Q3UW12 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cnga4Q3UW12 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cnga4Q3UW12 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cnga4Q3UW12 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cnga4Q3UW12 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.89■□□□□ 0.93
Cnga4Q3UW12 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cnga4Q3UW12 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cnga4Q3UW12 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Golph3-202ENSMUST00000226517 2359 ntBASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnga4Q3UW12 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnga4Q3UW12 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cnga4Q3UW12 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnga4Q3UW12 Gm6311-201ENSMUST00000073790 878 ntBASIC20.87■□□□□ 0.93
Cnga4Q3UW12 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cnga4Q3UW12 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnga4Q3UW12 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnga4Q3UW12 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnga4Q3UW12 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cnga4Q3UW12 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms