Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fndc4Q3TR08 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Fndc4Q3TR08 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fndc4Q3TR08 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fndc4Q3TR08 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fndc4Q3TR08 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Fndc4Q3TR08 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fndc4Q3TR08 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Fndc4Q3TR08 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fndc4Q3TR08 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fndc4Q3TR08 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.44■□□□□ 0.38
Fndc4Q3TR08 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fndc4Q3TR08 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Fndc4Q3TR08 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.42■□□□□ 0.38
Fndc4Q3TR08 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fndc4Q3TR08 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.42■□□□□ 0.38
Fndc4Q3TR08 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fndc4Q3TR08 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fndc4Q3TR08 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fndc4Q3TR08 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fndc4Q3TR08 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fndc4Q3TR08 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fndc4Q3TR08 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Fndc4Q3TR08 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Fndc4Q3TR08 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms