Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcaP82350 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcaP82350 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcaP82350 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.18■□□□□ 0.34
SgcaP82350 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcaP82350 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcaP82350 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SgcaP82350 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcaP82350 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcaP82350 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcaP82350 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcaP82350 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SgcaP82350 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcaP82350 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SgcaP82350 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SgcaP82350 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcaP82350 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcaP82350 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SgcaP82350 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SgcaP82350 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SgcaP82350 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SgcaP82350 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.16■□□□□ 0.34
SgcaP82350 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
SgcaP82350 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcaP82350 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.15■□□□□ 0.34
SgcaP82350 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SgcaP82350 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SgcaP82350 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SgcaP82350 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.14■□□□□ 0.33
SgcaP82350 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SgcaP82350 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.14■□□□□ 0.33
SgcaP82350 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Gm44428-201ENSMUST00000204474 874 ntBASIC17.14■□□□□ 0.33
SgcaP82350 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.14■□□□□ 0.33
SgcaP82350 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.14■□□□□ 0.33
SgcaP82350 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SgcaP82350 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcaP82350 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.13■□□□□ 0.33
SgcaP82350 Golph3-202ENSMUST00000226517 2359 ntBASIC17.13■□□□□ 0.33
SgcaP82350 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SgcaP82350 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SgcaP82350 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcaP82350 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SgcaP82350 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgcaP82350 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcaP82350 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcaP82350 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcaP82350 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SgcaP82350 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
SgcaP82350 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SgcaP82350 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcaP82350 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcaP82350 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcaP82350 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgcaP82350 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SgcaP82350 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcaP82350 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcaP82350 Gm7432-201ENSMUST00000210343 879 ntBASIC17.12■□□□□ 0.33
SgcaP82350 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcaP82350 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SgcaP82350 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcaP82350 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SgcaP82350 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SgcaP82350 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SgcaP82350 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcaP82350 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcaP82350 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SgcaP82350 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcaP82350 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.11■□□□□ 0.33
SgcaP82350 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms