Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav17A0A075B655 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.37■□□□□ 0.21
Trav17A0A075B655 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav17A0A075B655 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.36■□□□□ 0.21
Trav17A0A075B655 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav17A0A075B655 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav17A0A075B655 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav17A0A075B655 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav17A0A075B655 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav17A0A075B655 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.35■□□□□ 0.21
Trav17A0A075B655 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav17A0A075B655 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav17A0A075B655 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav17A0A075B655 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.35■□□□□ 0.21
Trav17A0A075B655 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav17A0A075B655 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav17A0A075B655 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav17A0A075B655 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trav17A0A075B655 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav17A0A075B655 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav17A0A075B655 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav17A0A075B655 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.33■□□□□ 0.2
Trav17A0A075B655 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav17A0A075B655 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav17A0A075B655 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav17A0A075B655 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav17A0A075B655 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav17A0A075B655 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.32■□□□□ 0.2
Trav17A0A075B655 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.32■□□□□ 0.2
Trav17A0A075B655 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trav17A0A075B655 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav17A0A075B655 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav17A0A075B655 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav17A0A075B655 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav17A0A075B655 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav17A0A075B655 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav17A0A075B655 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav17A0A075B655 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav17A0A075B655 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav17A0A075B655 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms