Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.05■□□□□ 0.64
Trav8n-2A0A075B633 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav8n-2A0A075B633 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav8n-2A0A075B633 Gm43173-201ENSMUST00000202246 593 ntBASIC19.04■□□□□ 0.64
Trav8n-2A0A075B633 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav8n-2A0A075B633 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trav8n-2A0A075B633 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav8n-2A0A075B633 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trav8n-2A0A075B633 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav8n-2A0A075B633 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav8n-2A0A075B633 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav8n-2A0A075B633 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav8n-2A0A075B633 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav8n-2A0A075B633 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8n-2A0A075B633 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8n-2A0A075B633 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8n-2A0A075B633 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8n-2A0A075B633 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trav8n-2A0A075B633 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8n-2A0A075B633 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.02■□□□□ 0.64
Trav8n-2A0A075B633 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8n-2A0A075B633 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
Trav8n-2A0A075B633 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8n-2A0A075B633 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8n-2A0A075B633 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8n-2A0A075B633 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8n-2A0A075B633 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8n-2A0A075B633 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8n-2A0A075B633 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19■□□□□ 0.63
Trav8n-2A0A075B633 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Gm26833-201ENSMUST00000180899 440 ntBASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Gm43530-201ENSMUST00000195920 274 ntBASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8n-2A0A075B633 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8n-2A0A075B633 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.98■□□□□ 0.63
Trav8n-2A0A075B633 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8n-2A0A075B633 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.98■□□□□ 0.63
Trav8n-2A0A075B633 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trav8n-2A0A075B633 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8n-2A0A075B633 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8n-2A0A075B633 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Gm12251-201ENSMUST00000117893 792 ntBASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8n-2A0A075B633 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav8n-2A0A075B633 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8n-2A0A075B633 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.96■□□□□ 0.63
Trav8n-2A0A075B633 Spcs1-204ENSMUST00000226782 949 ntBASIC18.96■□□□□ 0.63
Trav8n-2A0A075B633 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8n-2A0A075B633 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav8n-2A0A075B633 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8n-2A0A075B633 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
Trav8n-2A0A075B633 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8n-2A0A075B633 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Trav8n-2A0A075B633 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav8n-2A0A075B633 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8n-2A0A075B633 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 Gm43060-201ENSMUST00000200621 289 ntBASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav8n-2A0A075B633 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms