Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Krr1Q8BGA5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krr1Q8BGA5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Krr1Q8BGA5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krr1Q8BGA5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krr1Q8BGA5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krr1Q8BGA5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Krr1Q8BGA5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krr1Q8BGA5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krr1Q8BGA5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krr1Q8BGA5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krr1Q8BGA5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krr1Q8BGA5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.5■□□□□ 0.71
Krr1Q8BGA5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krr1Q8BGA5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.5■□□□□ 0.71
Krr1Q8BGA5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Krr1Q8BGA5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krr1Q8BGA5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Krr1Q8BGA5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.49■□□□□ 0.71
Krr1Q8BGA5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Krr1Q8BGA5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Krr1Q8BGA5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.49■□□□□ 0.71
Krr1Q8BGA5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.49■□□□□ 0.71
Krr1Q8BGA5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krr1Q8BGA5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Krr1Q8BGA5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Krr1Q8BGA5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Krr1Q8BGA5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Krr1Q8BGA5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Krr1Q8BGA5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.48■□□□□ 0.71
Krr1Q8BGA5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Krr1Q8BGA5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Krr1Q8BGA5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krr1Q8BGA5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krr1Q8BGA5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Krr1Q8BGA5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krr1Q8BGA5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krr1Q8BGA5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Krr1Q8BGA5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krr1Q8BGA5 Gm10420-201ENSMUST00000121713 882 ntBASIC19.46■□□□□ 0.71
Krr1Q8BGA5 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.46■□□□□ 0.71
Krr1Q8BGA5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krr1Q8BGA5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krr1Q8BGA5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.46■□□□□ 0.71
Krr1Q8BGA5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krr1Q8BGA5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.45■□□□□ 0.7
Krr1Q8BGA5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Krr1Q8BGA5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krr1Q8BGA5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krr1Q8BGA5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Krr1Q8BGA5 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms