Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.59■□□□□ 0.73
Brf2Q3UAW9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Brf2Q3UAW9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brf2Q3UAW9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Brf2Q3UAW9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Brf2Q3UAW9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brf2Q3UAW9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brf2Q3UAW9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brf2Q3UAW9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Brf2Q3UAW9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.58■□□□□ 0.72
Brf2Q3UAW9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brf2Q3UAW9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.57■□□□□ 0.72
Brf2Q3UAW9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brf2Q3UAW9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brf2Q3UAW9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.56■□□□□ 0.72
Brf2Q3UAW9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Brf2Q3UAW9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Brf2Q3UAW9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brf2Q3UAW9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brf2Q3UAW9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Brf2Q3UAW9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brf2Q3UAW9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brf2Q3UAW9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.53■□□□□ 0.72
Brf2Q3UAW9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Brf2Q3UAW9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brf2Q3UAW9 Gm13238-201ENSMUST00000117655 780 ntBASIC19.53■□□□□ 0.72
Brf2Q3UAW9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.53■□□□□ 0.72
Brf2Q3UAW9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf2Q3UAW9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf2Q3UAW9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Brf2Q3UAW9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Brf2Q3UAW9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Brf2Q3UAW9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Brf2Q3UAW9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.51■□□□□ 0.71
Brf2Q3UAW9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf2Q3UAW9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf2Q3UAW9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Brf2Q3UAW9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.5■□□□□ 0.71
Brf2Q3UAW9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf2Q3UAW9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Brf2Q3UAW9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf2Q3UAW9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf2Q3UAW9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Brf2Q3UAW9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.49■□□□□ 0.71
Brf2Q3UAW9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf2Q3UAW9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf2Q3UAW9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Brf2Q3UAW9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.48■□□□□ 0.71
Brf2Q3UAW9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf2Q3UAW9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf2Q3UAW9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.48■□□□□ 0.71
Brf2Q3UAW9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf2Q3UAW9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf2Q3UAW9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf2Q3UAW9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brf2Q3UAW9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brf2Q3UAW9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Brf2Q3UAW9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brf2Q3UAW9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Brf2Q3UAW9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Brf2Q3UAW9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms