Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.82■□□□□ 0.6
Cdh11P55288 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.82■□□□□ 0.6
Cdh11P55288 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh11P55288 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh11P55288 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Cdh11P55288 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh11P55288 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh11P55288 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh11P55288 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh11P55288 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh11P55288 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.8■□□□□ 0.6
Cdh11P55288 Gm13238-201ENSMUST00000117655 780 ntBASIC18.8■□□□□ 0.6
Cdh11P55288 Gm15820-201ENSMUST00000201566 728 ntBASIC18.8■□□□□ 0.6
Cdh11P55288 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh11P55288 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdh11P55288 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh11P55288 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh11P55288 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh11P55288 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh11P55288 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh11P55288 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdh11P55288 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh11P55288 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh11P55288 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh11P55288 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh11P55288 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdh11P55288 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh11P55288 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh11P55288 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh11P55288 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh11P55288 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh11P55288 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cdh11P55288 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.77■□□□□ 0.6
Cdh11P55288 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh11P55288 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdh11P55288 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.77■□□□□ 0.6
Cdh11P55288 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
Cdh11P55288 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Cdh11P55288 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cdh11P55288 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdh11P55288 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh11P55288 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh11P55288 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh11P55288 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdh11P55288 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Cdh11P55288 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh11P55288 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdh11P55288 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh11P55288 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh11P55288 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cdh11P55288 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Cdh11P55288 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh11P55288 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh11P55288 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.75■□□□□ 0.59
Cdh11P55288 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh11P55288 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
Cdh11P55288 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.74■□□□□ 0.59
Cdh11P55288 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cdh11P55288 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cdh11P55288 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cdh11P55288 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cdh11P55288 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh11P55288 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cdh11P55288 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh11P55288 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh11P55288 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh11P55288 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh11P55288 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh11P55288 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Cdh11P55288 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Cdh11P55288 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdh11P55288 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.73■□□□□ 0.59
Cdh11P55288 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdh11P55288 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh11P55288 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.73■□□□□ 0.59
Cdh11P55288 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.73■□□□□ 0.59
Cdh11P55288 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh11P55288 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.73■□□□□ 0.59
Cdh11P55288 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh11P55288 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh11P55288 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh11P55288 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh11P55288 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh11P55288 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh11P55288 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh11P55288 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh11P55288 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdh11P55288 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.72■□□□□ 0.59
Cdh11P55288 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh11P55288 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh11P55288 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh11P55288 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh11P55288 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cdh11P55288 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh11P55288 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.71■□□□□ 0.59
Cdh11P55288 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh11P55288 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cdh11P55288 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh11P55288 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh11P55288 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms