Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh4P39038 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh4P39038 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh4P39038 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh4P39038 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh4P39038 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh4P39038 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh4P39038 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cdh4P39038 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.87■□□□□ 0.77
Cdh4P39038 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.87■□□□□ 0.77
Cdh4P39038 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh4P39038 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh4P39038 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh4P39038 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.87■□□□□ 0.77
Cdh4P39038 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh4P39038 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh4P39038 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh4P39038 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh4P39038 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh4P39038 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh4P39038 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cdh4P39038 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh4P39038 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cdh4P39038 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh4P39038 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh4P39038 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh4P39038 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.85■□□□□ 0.77
Cdh4P39038 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh4P39038 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cdh4P39038 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh4P39038 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.85■□□□□ 0.77
Cdh4P39038 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.84■□□□□ 0.77
Cdh4P39038 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.84■□□□□ 0.77
Cdh4P39038 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh4P39038 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh4P39038 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.83■□□□□ 0.77
Cdh4P39038 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cdh4P39038 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh4P39038 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh4P39038 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh4P39038 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh4P39038 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh4P39038 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh4P39038 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh4P39038 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh4P39038 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdh4P39038 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh4P39038 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cdh4P39038 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Cdh4P39038 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh4P39038 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cdh4P39038 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cdh4P39038 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.81■□□□□ 0.76
Cdh4P39038 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.81■□□□□ 0.76
Cdh4P39038 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.81■□□□□ 0.76
Cdh4P39038 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh4P39038 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh4P39038 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cdh4P39038 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cdh4P39038 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cdh4P39038 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.8■□□□□ 0.76
Cdh4P39038 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.79■□□□□ 0.76
Cdh4P39038 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh4P39038 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh4P39038 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cdh4P39038 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh4P39038 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh4P39038 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh4P39038 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh4P39038 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh4P39038 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh4P39038 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh4P39038 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh4P39038 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cdh4P39038 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh4P39038 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh4P39038 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdh4P39038 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdh4P39038 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.77■□□□□ 0.75
Cdh4P39038 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.76■□□□□ 0.75
Cdh4P39038 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh4P39038 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms