Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rnf213E9Q555 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.4□□□□□ -0.75
Rnf213E9Q555 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rnf213E9Q555 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Rnf213E9Q555 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Mir7071-201ENSMUST00000184847 69 ntBASIC10.39□□□□□ -0.75
Rnf213E9Q555 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Rnf213E9Q555 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf213E9Q555 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC10.39□□□□□ -0.75
Rnf213E9Q555 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf213E9Q555 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf213E9Q555 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf213E9Q555 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf213E9Q555 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf213E9Q555 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf213E9Q555 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.38□□□□□ -0.75
Rnf213E9Q555 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC10.38□□□□□ -0.75
Rnf213E9Q555 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC10.38□□□□□ -0.75
Rnf213E9Q555 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf213E9Q555 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Gm43759-201ENSMUST00000196925 1261 ntBASIC10.37□□□□□ -0.75
Rnf213E9Q555 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rnf213E9Q555 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rnf213E9Q555 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf213E9Q555 AC158990.1-201ENSMUST00000221450 2016 ntBASIC10.37□□□□□ -0.75
Rnf213E9Q555 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf213E9Q555 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf213E9Q555 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC10.37□□□□□ -0.75
Rnf213E9Q555 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Gm10209-201ENSMUST00000203397 1607 ntBASIC10.36□□□□□ -0.75
Rnf213E9Q555 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf213E9Q555 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Kdm3b-204ENSMUST00000224715 2032 ntBASIC10.35□□□□□ -0.75
Rnf213E9Q555 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Gm22240-201ENSMUST00000175225 82 ntBASIC10.35□□□□□ -0.75
Rnf213E9Q555 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC10.35□□□□□ -0.75
Rnf213E9Q555 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf213E9Q555 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Rnf213E9Q555 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.34□□□□□ -0.75
Rnf213E9Q555 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf213E9Q555 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 180.5 ms