Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Upk1bQ9Z2C6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Upk1bQ9Z2C6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1bQ9Z2C6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1bQ9Z2C6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1bQ9Z2C6 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.34■□□□□ 0.69
Upk1bQ9Z2C6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Upk1bQ9Z2C6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1bQ9Z2C6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.34■□□□□ 0.69
Upk1bQ9Z2C6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1bQ9Z2C6 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.33■□□□□ 0.69
Upk1bQ9Z2C6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upk1bQ9Z2C6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Upk1bQ9Z2C6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upk1bQ9Z2C6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Upk1bQ9Z2C6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upk1bQ9Z2C6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upk1bQ9Z2C6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Upk1bQ9Z2C6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Upk1bQ9Z2C6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upk1bQ9Z2C6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1bQ9Z2C6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1bQ9Z2C6 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.3■□□□□ 0.68
Upk1bQ9Z2C6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk1bQ9Z2C6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk1bQ9Z2C6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk1bQ9Z2C6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk1bQ9Z2C6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk1bQ9Z2C6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk1bQ9Z2C6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.29■□□□□ 0.68
Upk1bQ9Z2C6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Upk1bQ9Z2C6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms