Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Herpud1Q9JJK5 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.33■□□□□ 0.37
Herpud1Q9JJK5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Herpud1Q9JJK5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Herpud1Q9JJK5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Herpud1Q9JJK5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.33■□□□□ 0.36
Herpud1Q9JJK5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Herpud1Q9JJK5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Herpud1Q9JJK5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Herpud1Q9JJK5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Herpud1Q9JJK5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Herpud1Q9JJK5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Herpud1Q9JJK5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Herpud1Q9JJK5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.31■□□□□ 0.36
Herpud1Q9JJK5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Herpud1Q9JJK5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Herpud1Q9JJK5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Herpud1Q9JJK5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Herpud1Q9JJK5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Herpud1Q9JJK5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Herpud1Q9JJK5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Herpud1Q9JJK5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Herpud1Q9JJK5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.3■□□□□ 0.36
Herpud1Q9JJK5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Herpud1Q9JJK5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Herpud1Q9JJK5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Gm10420-201ENSMUST00000121713 882 ntBASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Herpud1Q9JJK5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Herpud1Q9JJK5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Herpud1Q9JJK5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Herpud1Q9JJK5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Herpud1Q9JJK5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Herpud1Q9JJK5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Herpud1Q9JJK5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Herpud1Q9JJK5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.27■□□□□ 0.36
Herpud1Q9JJK5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Herpud1Q9JJK5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Herpud1Q9JJK5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.27■□□□□ 0.35
Herpud1Q9JJK5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Herpud1Q9JJK5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Herpud1Q9JJK5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Herpud1Q9JJK5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.27■□□□□ 0.35
Herpud1Q9JJK5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Herpud1Q9JJK5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Herpud1Q9JJK5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Herpud1Q9JJK5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms