Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb1Q91XX8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb1Q91XX8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb1Q91XX8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.73■■□□□ 1.07
Pcdhgb1Q91XX8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb1Q91XX8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhgb1Q91XX8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb1Q91XX8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Pcdhgb1Q91XX8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb1Q91XX8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhgb1Q91XX8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.72■■□□□ 1.07
Pcdhgb1Q91XX8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb1Q91XX8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhgb1Q91XX8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdhgb1Q91XX8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.71■■□□□ 1.07
Pcdhgb1Q91XX8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhgb1Q91XX8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhgb1Q91XX8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb1Q91XX8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Gm9847-201ENSMUST00000052528 599 ntBASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb1Q91XX8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb1Q91XX8 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Gm21956-201ENSMUST00000179946 522 ntBASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb1Q91XX8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb1Q91XX8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb1Q91XX8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb1Q91XX8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb1Q91XX8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb1Q91XX8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb1Q91XX8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb1Q91XX8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.64■■□□□ 1.06
Pcdhgb1Q91XX8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Pcdhgb1Q91XX8 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.64■■□□□ 1.06
Pcdhgb1Q91XX8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhgb1Q91XX8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb1Q91XX8 Gm13241-201ENSMUST00000094493 780 ntBASIC21.64■■□□□ 1.05
Pcdhgb1Q91XX8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.64■■□□□ 1.05
Pcdhgb1Q91XX8 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.64■■□□□ 1.05
Pcdhgb1Q91XX8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb1Q91XX8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb1Q91XX8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb1Q91XX8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb1Q91XX8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhgb1Q91XX8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb1Q91XX8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb1Q91XX8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms