Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpa1Q8VEE4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rpa1Q8VEE4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpa1Q8VEE4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpa1Q8VEE4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpa1Q8VEE4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpa1Q8VEE4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.94■□□□□ 0.94
Rpa1Q8VEE4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rpa1Q8VEE4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rpa1Q8VEE4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpa1Q8VEE4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rpa1Q8VEE4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpa1Q8VEE4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpa1Q8VEE4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpa1Q8VEE4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpa1Q8VEE4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpa1Q8VEE4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpa1Q8VEE4 Gm44428-201ENSMUST00000204474 874 ntBASIC20.92■□□□□ 0.94
Rpa1Q8VEE4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rpa1Q8VEE4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.92■□□□□ 0.94
Rpa1Q8VEE4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpa1Q8VEE4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpa1Q8VEE4 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.91■□□□□ 0.94
Rpa1Q8VEE4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpa1Q8VEE4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpa1Q8VEE4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpa1Q8VEE4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.9■□□□□ 0.94
Rpa1Q8VEE4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rpa1Q8VEE4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Rpa1Q8VEE4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpa1Q8VEE4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpa1Q8VEE4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpa1Q8VEE4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpa1Q8VEE4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rpa1Q8VEE4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpa1Q8VEE4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rpa1Q8VEE4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpa1Q8VEE4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpa1Q8VEE4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpa1Q8VEE4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpa1Q8VEE4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.86■□□□□ 0.93
Rpa1Q8VEE4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpa1Q8VEE4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpa1Q8VEE4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpa1Q8VEE4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpa1Q8VEE4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpa1Q8VEE4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpa1Q8VEE4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rpa1Q8VEE4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 192.2 ms