Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrif1Q8CDD9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lrif1Q8CDD9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrif1Q8CDD9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrif1Q8CDD9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lrif1Q8CDD9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.61■□□□□ 0.89
Lrif1Q8CDD9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrif1Q8CDD9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrif1Q8CDD9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lrif1Q8CDD9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrif1Q8CDD9 Gm44428-201ENSMUST00000204474 874 ntBASIC20.6■□□□□ 0.89
Lrif1Q8CDD9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.6■□□□□ 0.89
Lrif1Q8CDD9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.6■□□□□ 0.89
Lrif1Q8CDD9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.6■□□□□ 0.89
Lrif1Q8CDD9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrif1Q8CDD9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lrif1Q8CDD9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrif1Q8CDD9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lrif1Q8CDD9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrif1Q8CDD9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrif1Q8CDD9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrif1Q8CDD9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Lrif1Q8CDD9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Lrif1Q8CDD9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lrif1Q8CDD9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Lrif1Q8CDD9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrif1Q8CDD9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.55■□□□□ 0.88
Lrif1Q8CDD9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrif1Q8CDD9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrif1Q8CDD9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrif1Q8CDD9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrif1Q8CDD9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lrif1Q8CDD9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrif1Q8CDD9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrif1Q8CDD9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.54■□□□□ 0.88
Lrif1Q8CDD9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrif1Q8CDD9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrif1Q8CDD9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lrif1Q8CDD9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrif1Q8CDD9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrif1Q8CDD9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Lrif1Q8CDD9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrif1Q8CDD9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrif1Q8CDD9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrif1Q8CDD9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrif1Q8CDD9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lrif1Q8CDD9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.52■□□□□ 0.88
Lrif1Q8CDD9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Lrif1Q8CDD9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lrif1Q8CDD9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lrif1Q8CDD9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Lrif1Q8CDD9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrif1Q8CDD9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.51■□□□□ 0.87
Lrif1Q8CDD9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrif1Q8CDD9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.51■□□□□ 0.87
Lrif1Q8CDD9 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.51■□□□□ 0.87
Lrif1Q8CDD9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lrif1Q8CDD9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrif1Q8CDD9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrif1Q8CDD9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrif1Q8CDD9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms