Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.46■□□□□ 0.39
Smim4Q8C1Q6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smim4Q8C1Q6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Smim4Q8C1Q6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smim4Q8C1Q6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smim4Q8C1Q6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smim4Q8C1Q6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smim4Q8C1Q6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smim4Q8C1Q6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smim4Q8C1Q6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.44■□□□□ 0.38
Smim4Q8C1Q6 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.44■□□□□ 0.38
Smim4Q8C1Q6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smim4Q8C1Q6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Mir6538-201ENSMUST00000183713 110 ntBASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smim4Q8C1Q6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Smim4Q8C1Q6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim4Q8C1Q6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.42■□□□□ 0.38
Smim4Q8C1Q6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.42■□□□□ 0.38
Smim4Q8C1Q6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Smim4Q8C1Q6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim4Q8C1Q6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim4Q8C1Q6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim4Q8C1Q6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Gm12366-201ENSMUST00000121722 873 ntBASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Gm5786-201ENSMUST00000085368 882 ntBASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smim4Q8C1Q6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smim4Q8C1Q6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Gm10420-201ENSMUST00000121713 882 ntBASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim4Q8C1Q6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Smim4Q8C1Q6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smim4Q8C1Q6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms