Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.22■□□□□ 0.83
Slc44a2Q8BY89 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a2Q8BY89 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc44a2Q8BY89 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
Slc44a2Q8BY89 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.21■□□□□ 0.83
Slc44a2Q8BY89 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a2Q8BY89 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.21■□□□□ 0.83
Slc44a2Q8BY89 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a2Q8BY89 Gm27502-201ENSMUST00000183495 199 ntBASIC20.21■□□□□ 0.83
Slc44a2Q8BY89 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a2Q8BY89 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a2Q8BY89 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a2Q8BY89 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc44a2Q8BY89 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc44a2Q8BY89 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc44a2Q8BY89 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.2■□□□□ 0.82
Slc44a2Q8BY89 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc44a2Q8BY89 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc44a2Q8BY89 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Slc44a2Q8BY89 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc44a2Q8BY89 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc44a2Q8BY89 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc44a2Q8BY89 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc44a2Q8BY89 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc44a2Q8BY89 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc44a2Q8BY89 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc44a2Q8BY89 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc44a2Q8BY89 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.19■□□□□ 0.82
Slc44a2Q8BY89 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc44a2Q8BY89 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc44a2Q8BY89 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc44a2Q8BY89 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc44a2Q8BY89 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc44a2Q8BY89 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.17■□□□□ 0.82
Slc44a2Q8BY89 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc44a2Q8BY89 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc44a2Q8BY89 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Slc44a2Q8BY89 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc44a2Q8BY89 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc44a2Q8BY89 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Slc44a2Q8BY89 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc44a2Q8BY89 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc44a2Q8BY89 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc44a2Q8BY89 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc44a2Q8BY89 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc44a2Q8BY89 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc44a2Q8BY89 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc44a2Q8BY89 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc44a2Q8BY89 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.15■□□□□ 0.82
Slc44a2Q8BY89 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc44a2Q8BY89 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc44a2Q8BY89 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc44a2Q8BY89 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Slc44a2Q8BY89 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc44a2Q8BY89 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.14■□□□□ 0.81
Slc44a2Q8BY89 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc44a2Q8BY89 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc44a2Q8BY89 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.13■□□□□ 0.81
Slc44a2Q8BY89 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc44a2Q8BY89 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc44a2Q8BY89 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc44a2Q8BY89 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc44a2Q8BY89 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc44a2Q8BY89 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc44a2Q8BY89 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc44a2Q8BY89 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.12■□□□□ 0.81
Slc44a2Q8BY89 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Gm14523-201ENSMUST00000117260 558 ntBASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Slc44a2Q8BY89 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc44a2Q8BY89 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a2Q8BY89 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms